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Tuesday, October 13, 2015

Neurological condition probably caused medieval scribe’s shaky handwriting Manuscript analysis suggests 13th cen

Nicene Creed


Scribes usually have pretty good handwriting. That’s not the case for one prolific 13th century writer known to scholars only as the Tremulous Hand of Worcester. Now scientists suggest the writer suffered from a neurological condition called essential tremor. Neurologist Jane Alty and historical handwriting researcher Deborah Thorpe, both of the University of York in England, made the retrospective diagnosis August 31 in Brain after studying the spidery wiggles that pervade the scribe’s writing. Essential tremor can cause shaking of the hands, head and voice and is distinct from other tremor-causing conditions such as Parkinson’s disease.

Here, the anonymous writer’s peculiar script is evident (lighter portion of text) in an early Middle English version of the Nicene Creed, a summary of the Christian faith. Buried in the manuscript are clues that helped the researchers conclude that essential tremor plagued the Tremulous Hand.

Chimpanzees show surprising flexibility on two feet

Chimpanzees show surprising flexibility on two feet


walking chimp

Chimpanzees don’t strut. But their surprisingly flexible two-legged stride suggests that, more than 3 million years ago, members of the human evolutionary family walked pretty well, a new study concludes.
Chimps rotate their upper bodies about as much as people do while walking, thus countering the force of their swinging hips, say paleoanthropologist Nathan Thompson of Stony Brook University in New York and his colleagues. So even if Australopithecus afarensis, a hominid best known for Lucy’s partial skeleton, had a somewhat chimplike build, that didn’t prevent these ancient hominids from sauntering efficiently across East African landscapes, the researchers propose October 6 in Nature Communications.
“We know now that the more chimplike aspects of Lucy’s trunk wouldn’t have posed a barrier to upright walking,” Thompson says.


Chemical tags on DNA appear to differ between gay and straight men



 

gay pride flag
BALTIMORE — Molecular tests may be able to distinguish homosexual from heterosexual men, a small study of twins suggests.
Chemical modifications to DNA that change the activity of genes without changing the genes’ information differ between homosexual and heterosexual men, researchers from UCLA David Geffen School of Medicine have discovered. Results of the unpublished study on the link between these modifications, called epigenetic tags, and sexual orientation were presented October 8 at the annual meeting of the American Society of Human Genetics. Comparing one type of epigenetic tag known as DNA methylation in pairs of twins in which one brother is gay and the other straight revealed patterns that distinguish one group from the other about 67 percent of the time, computational geneticist Tuck Ngun and colleagues say.
The work already has provoked controversy, with some scientists questioning its methodology and others worried about how the research could be used. Some are concerned that the research could be misinterpreted as one step in an effort to “cure” homosexuality. Nothing could be further from the researchers’ intentions, say Ngun and Eric Vilain, the geneticist who heads the research group. “None of us see homosexuality as a disorder or something to be fixed,” Ngun said. “We’re just interested in what makes us tick.”
Very little is known about how human sexual preferences of any type arise, Vilain adds. That’s especially true on a biological level. “Our research is not about homosexuality,” he says. “It’s about understanding sexual attraction, the biology of desire.”
Previous studies have found tentative genetic links to male sexual orientation, but no one has identified a “gay gene” or genes. Still, the development of sexuality seems to have origins early in life, maybe even stemming from cues in the womb. For instance, for each biological older brother a man has, his likelihood of being homosexual rises by 33 percent. That finding has been replicated in several studies and could indicate that some condition in the womb sets epigenetic marks, which later influence preference of sexual partners.
Epigenetic marks have been shown to influence behaviors in rodents such as maternal care and drug addiction (SN: 5/24/08, p. 14). Whether and how these marks are involved in human behavior is still a matter of intense debate, says Peng Jin, a human geneticist at Emory University in Atlanta. Exploring whether they are associated with sexual preference isn’t unreasonable, Jin says, he’s just not sure the researchers have gone about it correctly. He also doubts that a study of less than 100 men has the statistical power to predict sexual orientation.
Ngun and colleagues measured DNA methylation levels in the saliva of 37 pairs of identical twins in which one twin self-identified as homosexual and the other as heterosexual. Another 10 pairs of twins in which both were gay also participated in the study. A computer program dubbed the FuzzyForest algorithm examined data from half of the gay and straight twins to learn how their DNA methylation patterns differed from each other. The initial round of training found 6,134 spots in the genome where the twins differed, but together those sites could correctly identify gay twins in the remaining pairs only 44 percent of the time. Narrowing down the number of sites to nine improved accuracy to 64 percent.
Further analysis involved the set of 10 pairs of gay twins. The researchers asked the computer program to pick out the spots that were different in the mixed orientation twins, but the same in the gay twins. That left five sites that could correctly identify 67 percent of gay twins in the test group.
Some of the regions may be involved in controlling activity of two genes: CIITA, which regulates activity of some immune system genes, and KIF1A, a gene involved in the transport of communication molecules in the brain.
The study raises many issues. Scientists question whether the finding will hold up in larger groups of unrelated people. Also, the computer algorithm hasn’t been tested on other datasets, raising concerns about whether the method is valid.
Vilain agrees that the study has limitations. “We’re looking at the wrong tissue at the wrong time,” he laments. The right tissue would be the brain, and ideally, researchers would be able to track DNA methylation changes over time from fetal stages on. Such research is not ethical in humans, so the team measured DNA methylation patterns in saliva taken from adult men, long after their sexual orientation had been determined. “There were no other choices,” he says.
DNA methylation patterns in saliva may not accurately reflect what is going on in the brain where behavior is controlled, Jin says. Saliva is not good material for epigenetic studies, he adds. The types of cells present in saliva can change dramatically depending on when and what a person has eaten and other factors. Different mixes of cells in the saliva would probably have different DNA methylation patterns that could further confuse the results. Blood would have been a more stable material to examine, although it also doesn’t always match what happens in the brain.
Vilain says his work has “zero clinical application.” This is not molecular gaydar, it’s simply a statistical measure that epigenetic marks differ between men of opposite sexual orientations, he says.
Whether the epigenetic changes are a determining factor in sexual orientation or a result of differing experiences in life, the study can’t determine, he says. But it may offer invaluable insight to the development of human sexuality, says pharmacologist Margaret McCarthy of the University of Maryland in College Park. "This study provides a major step forward in our understanding of how the brain can be affected by factors outside of the genome,” she said in a statement to the Genetic Expert News Service. “Regardless of when, or even how, these epigenetic changes occur, their findings demonstrates a biological basis to partner preference.”

Wednesday, October 7, 2015

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Monday, September 7, 2015

The sad magnetic state of the solar system’s rocky worlds

The sad magnetic state of the solar system’s rocky worlds



A powerful global magnetic field envelops Earth in a cozy blanket of protection against bursts of solar particles (see "The magnetic mystery at the center of the Earth"). But the solar system’s other rocky worlds aren’t so lucky.

Mercury
Mercury: Paltry

The most petite planet has an appropriately puny magnetic field, just 1.1 percent as strong as Earth’s (SN Online: 5/7/15).

Venus
Venus: Zilch

Earth’s nearest neighbor doesn’t generate a planet-wide magnetic field, so the solar wind penetrates and is gradually stripping away the atmosphere.

moon
The moon: Lost

Magnetized lunar rocks hauled back by Apollo astronauts show that, at some point, the ancient moon had a hefty magnetic field. It has since died out (SN Online: 12/4/14).

Mars
Mars: Collapsed

The Red Planet lacks a global magnetic field today, but magnetized regions of Martian crust point to an ancient magnetic field that eventually fizzled.

Wednesday, August 12, 2015

Fish oil may counter schizophrenia

Fish oil may counter schizophrenia


fish oil pills
PROTECTION IN A PILL? Widely available fish oil supplements may protect against psychosis, a small study suggests.  
Such enduring benefits would be extraordinary, if correct, says psychiatrist Jeffrey Lieberman of Columbia University Medical Center in New York City. “I don’t want to sound like a cynic or a skeptic, but it’s almost too good to be true.” Larger studies must confirm the results, he says. “I still want to see replication before I’m ready to say we have a new standard of care.”

Sunday, June 14, 2015

Aging: Nature’s way of reducing competition for resources

Aging: Nature’s way of reducing competition for resources

Organisms with and without a genetic mutation for mortality
LIVE LONG, DON’T PROSPER  In this simulation, a genetic mutation for mortality spreads through a population of immortals, providing evidence that evolution selects for shortened life spans. Organisms with a finite life span (blue) win out over immortals (red) as they compete for resources (yellow).
The aches, pains and disease that come with age may be nature’s method of population control.
Aging is a genetic mechanism that prevents humans and other organisms from living as long as they could, scientists argue in a study published June 12 in Physical Review Letters. The scientists propose that age-related ailments provide the evolutionary benefit of shortening life span, which conserves resources for future generations. Scientists could greatly extend life expectancy by deactivating the machinery for aging embedded in our DNA, the researchers assert.
“I don’t think it’s unreasonable to think we could extend the human life span by multiples,” says study coauthor Yaneer Bar-Yam of the New England Complex Systems Institute in Cambridge, Mass.

A circadian clock transplant gives E. coli rhythm

A circadian clock transplant gives E. coli rhythm


Circadian rhythm graphs
DAILY RHYTHM  By transplanting a molecular clock into E. coli bacteria, researchers can control the timing of the production of a protein that glows green, as seen in this diagram.
View the video
A ticking clock in the belly warned Captain Hook of a crocodile’s approach. A different kind of internal clock in gut bacteria may one day prove just as helpful.
Researchers have transplanted a simple circadian clock from cyanobacteria — also known as blue-green algae — into E. coli. The feat, researchers report June 12 in Science Advances, is a first step toward creating organisms that may stave off jet lag or even make drugs on a schedule.

Rendezvous with Pluto

Rendezvous with Pluto

Tiny, far-flung Pluto is about to have a visitor — at least for a few hours.
On July 14, NASA’s New Horizons spacecraft will reach the dwarf planet and try to learn all it can about Pluto and its five known moons. Then the probe will leave Pluto behind, vanishing into the frigid darkness beyond the planets.
In its wake, New Horizons will introduce Earth to the last of the “classical planets.” Probes have flown past, orbited, crashed into or landed on every other world that orbits the sun. Now Pluto is getting its turn.
“This is the last picture show,” says Alan Stern, the mission’s leader. “It’s the capstone moment to the reconnaissance of the planets.”

Pluto is the doorway to the solar system’s “third zone,” the Kuiper belt, an icy junkyard beyond Neptune. Far from the meddlesome heat of the sun, Pluto swims in a sea of frozen fossils that are mostly unchanged since the birth of the solar system, 4.6 billion years ago.
Pluto in 1930 and 2015
An image taken 75 million kilometers from Pluto (bottom) shows hints of details not visible in 1930.
LOWELL OBSERVATORY (TOP), NASA, JHUAPL, SWRI (BOTTOM)

New Horizons has been traveling for 9.5 years across nearly 5 billion kilometers to take a hard, if quick, look at Pluto and its icy neighbors. Cameras will chart the landscape on a world where the atmosphere may freeze for nearly 200 years at a stretch. They may find nitrogen volcanoes or hints of a bygone subsurface ocean. The probe will also explore why Pluto’s tenuous atmosphere is leaking into space. Pluto’s tiny moons may even provide a peek at what the building blocks of the planets look like.
Anticipation is building as the encounter to reveal Pluto’s secrets draws near. “For a lot of people, this is something completely new — to see a point of light become a real place overnight,” says Stern, of the Southwest Research Institute in Boulder, Colo.

An odd little world

Flagstaff, Ariz., has a touch of Pluto fever.
Stroll downtown to a local coffee shop and you can order a Pluto Mocha. From there it’s a five-minute walk to a sushi place for Pluto Rolls. A boutique around the corner sells handcrafted Pluto ornaments — one batch made before New Horizons’ arrival and one planned for after.
Flagstaff is where Pluto’s story began to be told. Near the center of town, on a mesa peppered with ponderosa pines, sits Lowell Observatory, where Clyde Tombaugh discovered the tiny world in 1930. About seven kilometers across town lies the U.S. Naval Observatory Flagstaff Station, where in 1978 astronomer James Christy noticed a smudge of light cozied up to Pluto, which turned out to be its largest moon, Charon.
Our view of Pluto hasn’t changed much over the last 85 years, despite debates about its worthiness of the title “planet.” From Tombaugh’s vantage point in Flagstaff, Pluto was a speck of light, slowly wandering against a backdrop of stars. And for the generations of astronomers with bigger and better telescopes that followed, Pluto has remained a mostly featureless spot on the sky.
Plans for visiting Pluto began in earnest in 1989. Several ideas for a mission came and went, but it was tough to justify flying to so remote a place. “I wasn’t entirely certain what to think about the New Horizons mission,” says Mike Brown, a planetary scientist at Caltech. “You learn by studying examples of things. If there was nothing else like Pluto, why go to this oddball?”
Pluto has always been an outlier, a diminutive ice-coated body on an orbit that carried it far above and well below the plane of the solar system. It even has the audacity to cross another planet’s (Neptune’s) orbit.
Story continues below timeline

Pluto: 85 years of discovery


A fortuitous finding in 1992 kicked off a decade of discovery that finally made Pluto worth visiting. “What really put this over the top,” Stern says, “was the discovery of the Kuiper belt.” Planetary scientists David Jewitt and Jane Luu spied a small body orbiting beyond Neptune. It was the first confirmed body in the Kuiper belt, a long-hypothesized ring of frozen debris encircling the sun.
Pluto was no longer an oddball. It and Charon (Pluto’s only moon known at the time) were emissaries from an uncharted realm of the solar system. Researchers have since cataloged more than 1,300 icy boulders tumbling about the Kuiper belt, a small sample of the trillion or so suspected.
With the discovery of the Kuiper belt, a National Academy of Sciences report in 2003 concluded that a mission to Pluto and Charon “should be NASA’s highest priority for medium-size missions in the decade 2003–2013.” Three years later — about eight months before the International Astronomical Union kicked Pluto out of the planet club (SN: 9/2/06, p. 149) — New Horizons was on its way.

Probe in a hurry

New Horizons launched on January 19, 2006, traveling about 58,000 kilometers per hour. It was the fastest spacecraft ever to leave Earth (at that speed a run from New York to Los Angeles would take about four minutes). New Horizons crossed the orbit of the moon nine hours after launch — a journey that took the Apollo 11 astronauts about three days.
The probe was in a hurry. Pluto has been moving farther from the sun along its orbit since 1989. The already frigid temperatures — a warm day maxes out at −223 degrees Celsius — are dropping. Pluto gets so cold that its atmosphere might freeze for most of its 248-year trip around the sun. New Horizons needed to get there before 2020, when the atmosphere could become a giant ice shell, blocking the probe from studying the dwarf planet’s surface and the dynamics of its atmosphere.
Unfortunately, it’s impossible for the spacecraft to slow down and take its time once it gets to Pluto. It will cross the face of Pluto in just under three minutes but will be close enough to map the surface for a few days. The mission is nearly a decade of boredom capped with hours of terror.
The vessel has spent most of the trek to Pluto asleep. Once a year, mission engineers checked its instruments and electronics. In early 2007, New Horizons got its first in-space practice run as it sidled up to Jupiter for a speed boost. The planet’s gravity grabbed the spacecraft and flung it into the outer solar system. At Jupiter, mission scientists did a little sightseeing, testing out the cameras and instruments on the giant planet and four of its moons.
After Jupiter, the spacecraft had almost eight years of cruising to go, silently crossing the orbits of Saturn, Uranus and Neptune. Finally, last December, engineers woke the probe at about 260 million kilometers from its destination (SN Online: 12/8/14).
“The spacecraft’s in good health, on final approach,” Stern says. “We’re just on the cusp of where it gets interesting.”
New Horizons moves more than 1 million kilometers closer to Pluto every day. The team is busy navigating the spacecraft, tweaking and testing the final sequence of commands, looking for hazards (see sidebar “Dodging debris”), finalizing the 150-plus software tools needed to analyze the data, and examining the first, still-blurry images of the fast-approaching world.
“It’s all just ramping up together into this exciting frenzy,” says Joel Parker, a planetary scientist also in Boulder, at the Southwest Research Institute. “We are starting to get data now. It’s just going to be more and better from here on out.”

On close examination

In January, early pictures began trickling in, showing a gradually brightening white smudge enveloped by darkness (SN Online: 2/4/15). Engineers use images snapped by New Horizons’ telephoto camera, the Long Range Reconnaissance Imager, or LORRI, to keep the spacecraft pointed in the right direction, just inside the orbit of the moon Charon. The pictures also let scientists get a peek at their quarry. In July 2013, LORRI got its first look at Charon. Two other moons, Nix and Hydra, came into view in late January (SN Online: 2/19/15). The tiniest moons, Kerberos and Styx, finally revealed themselves in late April (SN Online: 5/13/15).
A sequence of images taken in early April showed the first hints of surface markings on Pluto itself, dark and light regions rotating in and out of view. A bright spot at the dwarf planet’s north pole hints at a polar ice cap (SN Online: 4/29/15). About 60 days before the encounter, the LORRI images surpassed the resolution of the most detailed pictures of Pluto, captured by the Hubble Space Telescope. From mid-May to July 14, every subsequent image will be the best one acquired of the Pluto system.
As New Horizons closes in, its other instruments will start analyzing Pluto from afar. An ultraviolet spectrometer nicknamed Alice will study Pluto’s atmosphere, examining its chemical makeup, density and temperature. Alice will also measure how quickly the atmosphere is leaking into space. The main camera, dubbed Ralph, will map the surface of Pluto and its moons (SN Online: 5/13/15), while LORRI zooms in for a more intimate look.
New Horizons’ 2.1-meter-wide radio dish will serve double duty as a link to Earth and as another probe of Pluto’s atmosphere. Two other instruments will monitor charged particles flying away from both Pluto and the sun. And a college student–built detector — an array of plastic films the size of a cake pan — is recording impacts with interplanetary dust for most of the long trek.
On July 12 and 13, New Horizons will send highlights of its most recent investigations as a backup.
And then, silence.

A protein variant can provide protection from deadly brain-wasting

A protein variant can provide protection from deadly brain-wasting


prions and disease
BRAIN DRAIN  Prion diseases, such as kuru and mad cow disease, result when a normal brain protein (lower left) morphs into a disease-causing form and converts its normal counterparts. The twisted proteins form clumps (upper center) or strands that cluster in large plaques (lower right) that kill brain cells. 
Ending cannibalism stopped a deadly brain-wasting disease called kuru. But evolution already had devised a cure for the prion disease, a new study shows.
Some of the Fore people of Papua New Guinea have a naturally occurring variant of a brain protein that prevents kuru and related diseases, researchers report online June 10 in Nature. “We’ve never seen anything before that is completely protective,” says study coauthor John Collinge, a neurologist and molecular biologist at University College London. “It just switches off the disease.”
Understanding how the variant protects against prion diseases may also give new insights into Alzheimer’s, Parkinson’s and many other neurological diseases caused by twisted forms of normal brain proteins, he says.


Chikungunya is on the move

Chikungunya is on the move


Map of chikungunya outbreaks and mosquito ranges


A crippling virus has slipped its bonds in Africa and Asia 
and Asia and is invading whole new continents faster than people can learn to pronounce its name. In one decade, chikungunya (chihk-uhn-GUHN-yuh) fever has gone from an obscure tropical ailment to an international threat, causing more than 3 million infections worldwide. The virus has established itself in Latin America and may now have the wherewithal to inflict its particular brand of misery in cooler climates.

Chikungunya rarely kills its victims, but it can bring a world of hurt. It comes on like the flu — fever, chills, headache, aching joints — and typically lingers for a week. Many patients later develop severe joint pain that can recur for months or years. In the Makonde language of East Africa, where the virus was first identified in 1952, chikungunya means “to walk bent over” or “to become contorted,” a reference to the stooped posture of many sufferers.
Just how chikungunya went global in 10 years is a story of international travel, viral mutations and an accomplice with wings. Historical accounts suggest that the mosquito-borne virus has ventured from its natural home in Africa several times, even hitting North America in the 1820s. But apart from settling into Southeast Asia in the late 1950s, other sorties from Africa have fizzled.
Not this time. In 2005, chikungunya departed Kenya, hit several islands in the Indian Ocean and spread like a brush fire through India and Southeast Asia, where it lingers today. In 2013, the strain of chikungunya that had been ensconced in Asia since the 1950s found its way to the Caribbean and even nicked Florida in 2014.
It’s not unprecedented for a tropical disease to reach other warm regions. But one strain of the chikungunya virus has found a way to survive in mosquitoes that live in temperate zones, leading to recent forays into Italy and France. North America, China and Europe are now fair game.
That means chikungunya could be coming to a mosquito near you. The virus has not established long-term roots in temperate zones, and no one knows whether it has the chops to do so. But Stephen Higgs, a parasitologist and chikungunya expert at Kansas State University in Manhattan, says U.S. outbreaks are a real possibility.

Crossing the pond

The sleepy island of Réunion sits isolated in the Indian Ocean, far from major shipping lanes. It would seem like an ideal place to dodge global health problems.
But in 2005 and 2006, the French territory became a jumping-off point for the epidemic of chikungunya that sprang from Kenya and still churns in Asia today. The scourge devastated Réunion, racking up 266,000 cases on an island of roughly 800,000 people. At the height of the outbreak, patients were streaming into clinics at a rate of 40,000 per week. The virus also blew through Madagascar, Comoros, Mauritius and Seychelles. When it made landfall in India in late 2005, chikungunya hit the jackpot, causing close to 1.4 million infections. From India it crossed Southeast Asia, spawning outbreaks in Thailand, Cambodia, Malaysia and elsewhere.
This explosion of infections from a previously obscure virus stunned global health experts. India had a spotty history of chikungunya, but hadn’t had a case in 32 years. Réunion had never seen it before. Something had changed.
Story continues after interactive map

Western migration

Hot spots of chikungunya transmission have cropped up widely over the last 60 years, lately reaching the Western Hemisphere. The first U.S. outbreak affected a handful of people in Florida, but elsewhere, outbreaks have varied from hundreds to more than 1 million suspected cases.
SOURCES: M.C. ROBINSON/TRANS. ROYAL SOC. TROP. MED. HYG. 1955; K.A. TSETSARKIN ET AL/PLOS PATH. 2007; REZZA ET AL/LANCET 2007; S.-D. THIBERVILLE ET AL/PLOS NEGL. TROP. DIS. 2013; PAHO MAY 2015; M.L.G. FIGUEIREDO AND L.T.M. FIGUEIREDO/REVISTA DA SOCIEDADE BRASILEIRA DE MEDICINA TROPICAL2014; S. HIGGS AND D. VANLANDINGHAM/VECTOR-BORN ZOO. DIS. 2015; M. AUBRY ET AL/EMERG. INFECT. DIS. 2015; A. POWERS AND C. LOGUE/J. GEN. VIROL. 2007; S. WEAVER AND M. LECUIT/NEJM 2015; S. WEAVER/PLOS NEGL. TROP. DIS. 2014; MOYEN ET AL/PLOS ONE 2014

Réunion seemed an odd stopover for chikungunya because the island had little or no Aedes aegypti, the tropical mosquito that typically carries the virus around Africa and Asia. Researchers soon figured out that the African chikungunya that hit Réunion had mutated to thrive inside a new carrier, the Asian tiger mosquito, Aedes albopictus (SN: 6/29/13, p. 26). Réunion, like many parts of the world, has tiger mosquitoes.
Before the virus mutated, the tiger mosquito couldn’t effectively spread chikungunya. But the mutation has rendered the virus 100 times as adaptable to the tiger mosquito’s innards as it once was. Specifically, the virus underwent a single amino acid change in one of its glycoproteins, a carbohydrate-protein mix called E1, making virus replication much easier in the tiger mosquito. When the mosquito takes a blood meal from a person carrying mutated chikungunya, the pathogen proliferates rapidly in the insect’s midgut and travels to its saliva. As a result, the mosquito’s next bite is like a hypodermic needle loaded with virus. Other mutations found later seemed to help this virus adapt to the tiger mosquito, its new host.

DRILLING DOWN One strain of chikungunya virus has found a way to hitchhike in the Asian tiger mosquito (bottom), which is found in much of the eastern United States. In the tropics, the most common chikungunya carrier is the Aedes aegypti mosquito (top).
BOTH: JAMES GATHANY/CDC
The tiger mosquito offered chikungunya what amounted to frequent flier miles on a fleet of jets bound for cooler climes. Within a few years the virus showed up in Italy and France, ferried from person to person by black-and-white striped tiger mosquitoes. Italy reported about 200 infections in 2007.
That’s a modest number, but it established that chikungunya could successfully venture outside the tropics. “That was a game changer,” says Scott Weaver, a virologist at the University of Texas Medical Branch in Galveston.

Westward bound

A second surprise came in 2013 when chikungunya showed up on the sun-splashed Caribbean island of Saint Martin. A traveler — from the Far East according to genetic characteristics of the virus — apparently arrived in Saint Martin carrying the virus and was bitten by a local mosquito, which then spread it to other people, says Ann Powers, a molecular virologist at the Centers for Disease Control and Prevention in Fort Collins, Colo. This launched the epidemic in the West.
“Our luck ran out,” Weaver says. In the ensuing year and a half, chikungunya established a foothold in the Americas that it may never relinquish. Florida had 11 cases in 2014 transmitted by local mosquitoes. The warm Gulf Coast may be at risk since the tropical Ae. aegypti,which appears to be driving the epidemic, can live there, says Higgs.
The good news for now is that the chikungunya strain that hit the Caribbean and Florida isn’t carried by the much-despised tiger mosquito, he adds. That’s probably why the Caribbean infections haven’t penetrated North America beyond Florida. If chikungunya were to catch on in Europe or the eastern United States, it would arrive in a sick traveler but would need to be a strain already adapted to the tiger mosquito.
Meanwhile, Ae. aegypti is spreading the Asian strain of chikungunya in Latin America and the Caribbean, with tens of thousands of cases confirmed and more than 1 million suspected. The epidemic has stretched to Brazil, which has reported hundreds of cases of person-to-mosquito-to-person spread.
Much of Brazil is home to both the tiger mosquito and Ae. aegypti, and scientists are trying to determine which insect is spreading the virus there. Brazil has a second two-headed problem: It has cases of the Asian strain of chikungunya that swept the Caribbean as well as the African strain of chikungunya that spilled into the Indian Ocean and learned to ride the tiger mosquito. Researchers don’t know yet if the African strain has mutated in Brazil as it did in Réunion and parts east.


If the virus in Brazil morphs, the West could face a worst-case scenario, because Panama, Mexico and many other countries also harbor both mosquitoes. The risk posed by having a version of chikungunya in the West that has adapted to temperate-zone carriers keeps U.S. infectious disease experts up at night.
“It’s certainly something I worry about,” says Mark Heise, a virologist at the University of North Carolina at Chapel Hill. There is plenty of air traffic between Brazil and North America, he says, and the tiger mosquito’s ever-expanding range includes much of the United States east of the Mississippi River.

To become contorted

The best that can be said about a case of chikungunya is that it confers lifetime immunity. People rarely get it twice. Once is bad enough.
Ann Powers first witnessed people with chikungunya in Comoros in the Indian Ocean, which was hit about the same time Réunion was. “It was incredible to see people in that much pain,” she says. Powers interviewed some patients as they lay down because their ankles were so inflamed they couldn’t stand. “Shaking hands hurt them,” she says.
In a long-term study of 102 Réunion patients, 60 percent still reported joint pain three years after contracting chikungunya, a French team reported in PLOS Neglected Tropical Diseases in 2013. In Italy, a one-year follow-up found nearly 67 percent of patients continued to have joint or muscle pain.
Why the virus goes after the joints is a mystery. Joints lack circulation, which might help the virus evade the immune system, Heise says.
The crippling joint symptoms can disable a whole community, says David Morens, a pediatric infectious disease physician at the National Institute of Allergy and Infectious Diseases in Bethesda, Md. “In Asia you see these really massive outbreaks where everybody gets sick at once. The whole town gets incapacitated. There are no taxicabs, no teachers.”
Pregnant women face special risks. Of 39 pregnant women in Réunion who had chikungunya fever around the time they were in labor, 19 had infected newborns. Ten of those infants developed serious complications, most with swelling of the brain. Four became disabled, a French research team reported inPLOS Medicine in 2008.
Treatment options are lacking. Aside from fever reducers and fluid replacement, the drug ribavirin shows some benefit. Antibodies from a recovered chikungunya patient might help an exposed person, but more testing is needed.
2013 study identified antibodies in mice that can neutralize chikungunya virus and prevent the animals from getting ill. The antibodies even worked when injected after the mice were exposed to the virus, but not if the animals were already showing symptoms, says Heise, who co­authored the report, in PLOS Pathogens.
One of the problems with chikungunya is how little scientists know about it. In humans, the incubation period — time between exposure and first symptoms — is a guesstimate of one to 12 days. Lab tests show mosquitoes other than Ae. aegypti and Asian tiger are capable of harboring the virus, but whether they do so extensively in the wild isn’t known. Chikungunya has circulated in Africa for hundreds of years. The natural reservoirs are understood to be nonhuman primates and maybe rodents or other animals. When a mosquito bites an infected animal, that infected blood can be transmitted to humans with the next bite. But even though Asia has millions of monkeys and a history of outbreaks, no wild reservoirs have been identified there.

Outwitting a tricky virus

The molecular structure of chikungunya may provide more guidance — and a way to stop it. The virus relies on two glycoproteins, E1 and E2, to enter and infect a cell. It targets cells found in the blood, muscle, joints, lymph nodes and liver. Once inside a cell, E1, E2 and other viral proteins trigger a complex series of events that revs up manufacture of more virus. In the Réunion outbreak, the mutational change in the viral E1 glyco­protein put this process into overdrive in the Asian tiger mosquito, which spread it around the island, Higgs and his colleagues reported in 2007 in PLOS Pathogens.

chikungunya virus particle
DAZZLINGLY DANGEROUS A chikungunya virus particle comes studded with tools for infecting cells. The E2 glyco­proteins (fuchsia) anchor the virus on cells by binding with protein docking stations called receptors. The E1 glycoproteins (red, blue and yellow) orchestrate cell penetration and virus replication. The viral membrane (green) encloses chikungunya’s genetic material. Once inside a cell, the virus induces its host to produce more virus.
FELIX REY/PASTEUR INSTITUTE
These same proteins might be turned against the virus in a vaccine. One candidate vaccine that contains E1, E2 and other chikungunya proteins can elicit an immune reaction in monkeys and people. In 25 volunteers, a three-shot regimen of these proteins triggered neutralizing antibodies against chikungunya after two doses, NIAID vaccine researcher Julie Ledgerwood and colleaguesreported December 6 in the Lancet.
The protection remained for 44 weeks and probably lasts longer, she says. Vaccination helped turn the corner against yellow fever, another mosquito-borne virus. While yellow fever is deadlier, it has been suppressed by a long-lasting vaccine and now crops up only sporadically, usually in parts of Africa with low vaccination rates.
Another group is testing a chikungunya vaccine added to a measles shot. At the 2014 meeting of the American Society of Tropical Medicine and Hygiene in New Orleans, Erich Tauber of Themis Bioscience GmbH in Vienna, reported that 42 healthy volunteers given the vaccine produced a strong immune response after the second shot of a three-shot regimen. And Weaver and his colleagues reported in theJournal of Infectious Diseases in 2014 that a vaccine they developed showed strong protection against chikungunya in monkeys.
These vaccines are likely to protect against all three major strains of chikungunya, Ledgerwood says, including the morphed virus carried by the tiger mosquito. The greater challenge may be to find funding for testing and mass production. “We’re not short on ideas or tools,” Higgs says. “We’re short on investment.” Whether Big Pharma will go all in against an obscure virus with a funny name is anyone’s guess.

North versus south

How chikungunya will play out in cool climates is equally unclear. If the virus sparks new outbreaks in temperate regions, they will probably be summertime events, Powers says. Winter would douse the fire in North America. “You’re much more likely to have annual reintroduction of the virus” in warm months by travelers coming from endemic areas, she says, than year-round spread.
The use of bug spray and mosquito avoidance might — at least in developed countries — offset the growing reach of the Asian tiger mosquito and thwart chikungunya.
“My feeling is that people in countries like Italy and the United States are probably not exposed to mosquitoes enough,” Weaver says. “We might see small outbreaks but not major epidemics,” thanks mainly to air-conditioning and window screens. Whether those upgrades will be enough to stall the disease remains unknown.
Heise says a lack of these amenities in poor parts of cities could make them high-risk areas. The Asian tiger, he says, “is an incredibly aggressive mosquito.”
For people in the American tropics, the deal may be done. “I don’t see us, in these circumstances, driving chikungunya out of South and Central America,” Higgs says.
Some tropical countries with both kinds of mosquitoes lack good sanitation and have people housed in close urban quarters, a recipe for mosquito-borne disease transmission, Morens says. These conditions, often considered the price of finding work and getting ahead in life, are an ideal setting for disease spread. “Human progress creates opportunities for microbial progress to follow,” he says.
Others doubt that the disease will linger in the West. Historically, chikungunya (mistaken for dengue before the 1950s) may have emerged from Africa every 50 or 60 years, run rampant and burned itself out, says Scott Halstead, an infectious disease physician at the Uniformed Services University of the Health Sciences in Bethesda, Md. He was in Asia in the 1960s when the virus seemed to do just that, even though conditions were ideal for its continued spread. For this reason, Halstead doubts that the current global expansion is permanent.
Morens says that for the virus to stay in the West, it has to either adapt itself to humans or to wild animals. If it infects New World monkeys, as yellow fever did, chikungunya could linger under the radar and periodically jump to people. This is what chikungunya does in Africa. “The other possibility is more alarming,” he says. “The virus adapts itself to a new cycle, completely human-to-mosquito-to-human. Once in that cycle, it’s almost never going to go away.” This is how dengue fever established itself in the Americas, and it’s how chikungunya spreads in Asia.
Infection rates in Central America are down during the current dry season. But that’s about to change, Powers says. “Expect an increase in the number of cases in the near future.” The rainy season is right around the corner.

Human laugh lines traced back to ape ancestors

Human laugh lines traced back to ape ancestors

chimps laughing
Laughter’s evolutionary story may be written on chimpanzees’ faces.
Chimps at play make open-mouth facial expressions while either laughing out loud or staying silent, say psychologist Marina Davila-Ross of the University of Portsmouth in England and her colleagues. These results suggest for the first time that a nonhuman primate can use facial expressions to communicate without making a sound, the researchers report June 10 in PLOS ONE.
Muscle movements in chimps’ laughing faces resemble those of humans in many ways, Davila-Ross’ team says. People’s mirthful facial expressions, sometimes paired with laughter, evolved from a simpler connection between open-mouthed expressions and laughter in ape ancestors of humans and chimps, the scientists propose.

Bronze Age humans racked up travel miles


Bronze Age humans racked up travel miles


skull
PAST JOURNEYS  This ocher-covered skull, found in southwestern Russia, comes from a member of the Bronze Age’s Yamnaya culture. A new genetic study reveals that this culture spread far and wide across Eurasia.


Humans’ Bronze Age ancestors were big travelers, but probably not so fond of dairy.  
A large-scale study of ancient genetics, published June 11 in Nature, provides evidence for migrations and lactose intolerance in Bronze Age cultures in Eurasia.
The Bronze Age, about 3,000 to 5,000 years ago, was a time of big cultural changes, says study coauthor Morten Allentoft, a geneticist at the Centre for GeoGenetics at the Natural History Museum of Denmark in Copenhagen. Archaeologists have argued about whether those changes came from the spread of ideas or the physical migration of ancient humans, Allentoft says.

Allentoft and his colleagues analyzed over 600 samples of Bronze Age human remains, mostly teeth, from Europe and Asia. Only 101 specimens provided usable DNA. The scientists extracted genetic material from the tooth’s hard outer layer, which preserves DNA better than the soft interior.
The study was unusually large in scale, says geneticist and coauthor Martin Sikora, also of the Denmark museum. That allowed the scientists to ask broad questions about the relationships between genes and cultures.
map
MOVING OUT Around 5,000 years ago, the Yamnaya culture migrated both west and east from what is now Eastern Europe, bringing shared customs to the younger Corded Ware and Afanasievo cultures. A new study finds that the Yamnaya and Afanasievo cultures are genetically indistinguishable.
ALLENTOFT ET AL/NATURE 2015
Allentoft says the most important finding is that the transition into the Bronze Age “certainly involved large-scale human migrations.” Geneticist Iosif Lazaridis of Harvard Medical School says that previous studies have indicated such migrations, though this work includes some new data. This study provides new evidence for eastward migration, says geneticist David Reich, also of Harvard Medical School. The findings suggest that the Yamnaya culture, a population of traveling herders that originated around 5,000 years ago in what is now southwestern Russia, is genetically indistinguishable from the slightly younger Afanasievo culture, which lived thousands of kilometers farther east.

One Eurasian Bronze Age culture showed genetic similarity to present-day Native Americans. This finding opens up new questions about human ancestry, says Sikora.
Only around 10 percent of Bronze Age Europeans had the ability to digest lactose, the study suggests. This percentage is surprisingly low, because these people had farming cultures with cattle, says Allentoft. Lactose tolerance is associated with a single change on the human lactase gene. The frequency of this genetic change must have increased dramatically after the Bronze Age, Allentoft says, because tolerance is widespread in Europe today. Previous research also has suggested this later onset of lactose tolerance, says Reich.
Allentoft says that large-scale studies like this one could help researchers understand other time periods, before and since the Bronze Age. The Bronze Age marks the last large genetic shift between ancestral and present-day humans, he says. “Looking at the Bronze Age could hold the key to our common identity, for Europeans and Asians of today.”

Tech in the classroom foreseen 50 years ago

Tech in the classroom foreseen 50 years ago


kids with tablets

UPDATE

The 1970s saw the advent of the Scantron, changing the face of multiple-choice tests. The arrival of the handheld calculator in the 1970s and the graphing calculator in 1985 then altered math and physics classes. Mass-market computers appeared in the early 1980s and quickly invaded classrooms. Now students around the world attend class on the Internet, and 3-D printers (SN: 3/9/13, p. 20) produce parts that students can use to invent and engineer. But despite technological change, some things remain the same. Students retain more when they take notes with pens than with laptops (SN: 5/31/14, p. 14).